add file source digest support (#1914)

Signed-off-by: Alex Goodman <wagoodman@users.noreply.github.com>

.gitignore

@@ -1,3 +1,5 @@
+go.work
+go.work.sum
 /.bin
 CHANGELOG.md
 VERSION

README.md

@@ -605,7 +605,7 @@ file-metadata:
     # SYFT_FILE_METADATA_CATALOGER_SCOPE env var
     scope: "squashed"
 
-  # the file digest algorithms to use when cataloging files (options: "sha256", "md5", "sha1")
+  # the file digest algorithms to use when cataloging files (options: "md5", "sha1", "sha224", "sha256", "sha384", "sha512")
   # SYFT_FILE_METADATA_DIGESTS env var
   digests: ["sha256"]
 
@@ -643,11 +643,27 @@ secrets:
   # SYFT_SECRETS_EXCLUDE_PATTERN_NAMES env var
   exclude-pattern-names: []
 
+# options that apply to all scan sources
+source:
+  # alias name for the source
+  # SYFT_SOURCE_NAME env var; --source-name flag
+  name: ""
+   
+  # alias version for the source
+  # SYFT_SOURCE_VERSION env var; --source-version flag
+  version: ""
+   
+  # options affecting the file source type
+  file:
+    # the file digest algorithms to use on the scanned file (options: "md5", "sha1", "sha224", "sha256", "sha384", "sha512")
+    digests: ["sha256"]
+
 # options when pulling directly from a registry via the "registry:" scheme
 registry:
   # skip TLS verification when communicating with the registry
   # SYFT_REGISTRY_INSECURE_SKIP_TLS_VERIFY env var
   insecure-skip-tls-verify: false
+
   # use http instead of https when connecting to the registry
   # SYFT_REGISTRY_INSECURE_USE_HTTP env var
   insecure-use-http: false

cmd/syft/cli/attest/attest.go

@@ -18,6 +18,7 @@ import (
 	"github.com/anchore/syft/cmd/syft/cli/packages"
 	"github.com/anchore/syft/internal/bus"
 	"github.com/anchore/syft/internal/config"
+	"github.com/anchore/syft/internal/file"
 	"github.com/anchore/syft/internal/log"
 	"github.com/anchore/syft/internal/ui"
 	"github.com/anchore/syft/syft"
@@ -74,18 +75,23 @@ func buildSBOM(app *config.Application, userInput string, errs chan error) (*sbo
 		}
 	}
 
+	hashers, err := file.Hashers(app.Source.File.Digests...)
+	if err != nil {
+		return nil, fmt.Errorf("invalid hash: %w", err)
+	}
+
 	src, err := detection.NewSource(
 		source.DetectionSourceConfig{
 			Alias: source.Alias{
-				Name:    app.SourceName,
-				Version: app.SourceVersion,
+				Name:    app.Source.Name,
+				Version: app.Source.Version,
 			},
 			RegistryOptions: app.Registry.ToOptions(),
 			Platform:        platform,
 			Exclude: source.ExcludeConfig{
 				Paths: app.Exclusions,
 			},
-			DigestAlgorithms: nil,
+			DigestAlgorithms: hashers,
 		},
 	)
 

cmd/syft/cli/eventloop/tasks.go

@@ -1,13 +1,10 @@
 package eventloop
 
 import (
-	"crypto"
-	"fmt"
-
 	"github.com/anchore/syft/internal/config"
+	"github.com/anchore/syft/internal/file"
 	"github.com/anchore/syft/syft"
 	"github.com/anchore/syft/syft/artifact"
-	"github.com/anchore/syft/syft/file"
 	"github.com/anchore/syft/syft/file/cataloger/filecontent"
 	"github.com/anchore/syft/syft/file/cataloger/filedigest"
 	"github.com/anchore/syft/syft/file/cataloger/filemetadata"
@@ -89,23 +86,9 @@ func generateCatalogFileDigestsTask(app *config.Application) (Task, error) {
 		return nil, nil
 	}
 
-	supportedHashAlgorithms := make(map[string]crypto.Hash)
-	for _, h := range []crypto.Hash{
-		crypto.MD5,
-		crypto.SHA1,
-		crypto.SHA256,
-	} {
-		supportedHashAlgorithms[file.DigestAlgorithmName(h)] = h
-	}
-
-	var hashes []crypto.Hash
-	for _, hashStr := range app.FileMetadata.Digests {
-		name := file.CleanDigestAlgorithmName(hashStr)
-		hashObj, ok := supportedHashAlgorithms[name]
-		if !ok {
-			return nil, fmt.Errorf("unsupported hash algorithm: %s", hashStr)
-		}
-		hashes = append(hashes, hashObj)
+	hashes, err := file.Hashers(app.FileMetadata.Digests...)
+	if err != nil {
+		return nil, err
 	}
 
 	digestsCataloger := filedigest.NewCataloger(hashes)

cmd/syft/cli/options/packages.go

@@ -86,11 +86,11 @@ func bindPackageConfigOptions(flags *pflag.FlagSet, v *viper.Viper) error {
 		return err
 	}
 
-	if err := v.BindPFlag("source-name", flags.Lookup("source-name")); err != nil {
+	if err := v.BindPFlag("source.name", flags.Lookup("source-name")); err != nil {
 		return err
 	}
 
-	if err := v.BindPFlag("source-version", flags.Lookup("source-version")); err != nil {
+	if err := v.BindPFlag("source.version", flags.Lookup("source-version")); err != nil {
 		return err
 	}
 

cmd/syft/cli/packages/packages.go

@@ -13,6 +13,7 @@ import (
 	"github.com/anchore/syft/internal"
 	"github.com/anchore/syft/internal/bus"
 	"github.com/anchore/syft/internal/config"
+	"github.com/anchore/syft/internal/file"
 	"github.com/anchore/syft/internal/ui"
 	"github.com/anchore/syft/internal/version"
 	"github.com/anchore/syft/syft"
@@ -77,18 +78,24 @@ func execWorker(app *config.Application, userInput string, writer sbom.Writer) <
 			}
 		}
 
+		hashers, err := file.Hashers(app.Source.File.Digests...)
+		if err != nil {
+			errs <- fmt.Errorf("invalid hash: %w", err)
+			return
+		}
+
 		src, err := detection.NewSource(
 			source.DetectionSourceConfig{
 				Alias: source.Alias{
-					Name:    app.SourceName,
-					Version: app.SourceVersion,
+					Name:    app.Source.Name,
+					Version: app.Source.Version,
 				},
 				RegistryOptions: app.Registry.ToOptions(),
 				Platform:        platform,
 				Exclude: source.ExcludeConfig{
 					Paths: app.Exclusions,
 				},
-				DigestAlgorithms: nil,
+				DigestAlgorithms: hashers,
 			},
 		)
 

cmd/syft/cli/poweruser/poweruser.go

@@ -94,8 +94,8 @@ func execWorker(app *config.Application, userInput string, writer sbom.Writer) <
 		src, err := detection.NewSource(
 			source.DetectionSourceConfig{
 				Alias: source.Alias{
-					Name:    app.SourceName,
-					Version: app.SourceVersion,
+					Name:    app.Source.Name,
+					Version: app.Source.Version,
 				},
 				RegistryOptions: app.Registry.ToOptions(),
 				Platform:        platform,

internal/config/application.go

@@ -61,8 +61,7 @@ type Application struct {
 	Exclusions             []string           `yaml:"exclude" json:"exclude" mapstructure:"exclude"`
 	Platform               string             `yaml:"platform" json:"platform" mapstructure:"platform"`
 	Name                   string             `yaml:"name" json:"name" mapstructure:"name"`
-	SourceName             string             `yaml:"source-name" json:"source-name" mapstructure:"source-name"`
-	SourceVersion          string             `yaml:"source-version" json:"source-version" mapstructure:"source-version"`
+	Source                 sourceCfg          `yaml:"source" json:"source" mapstructure:"source"`
 	Parallelism            int                `yaml:"parallelism" json:"parallelism" mapstructure:"parallelism"`                                           // the number of catalog workers to run in parallel
 	DefaultImagePullSource string             `yaml:"default-image-pull-source" json:"default-image-pull-source" mapstructure:"default-image-pull-source"` // specify default image pull source
 }
@@ -147,8 +146,8 @@ func (cfg *Application) parseConfigValues() error {
 
 	if cfg.Name != "" {
 		log.Warnf("name parameter is deprecated. please use: source-name. name will be removed in a future version")
-		if cfg.SourceName == "" {
-			cfg.SourceName = cfg.Name
+		if cfg.Source.Name == "" {
+			cfg.Source.Name = cfg.Name
 		}
 	}
 

internal/config/source.go

@@ -0,0 +1,17 @@
+package config
+
+import "github.com/spf13/viper"
+
+type sourceCfg struct {
+	Name    string     `json:"name" yaml:"name" mapstructure:"name"`
+	Version string     `json:"version" yaml:"version" mapstructure:"version"`
+	File    fileSource `json:"file" yaml:"file" mapstructure:"file"`
+}
+
+type fileSource struct {
+	Digests []string `json:"digests" yaml:"digests" mapstructure:"digests"`
+}
+
+func (cfg sourceCfg) loadDefaultValues(v *viper.Viper) {
+	v.SetDefault("source.file.digests", []string{"sha256"})
+}

internal/file/digest.go

@@ -0,0 +1,76 @@
+package file
+
+import (
+	"crypto"
+	"fmt"
+	"hash"
+	"io"
+	"strings"
+
+	"github.com/anchore/syft/syft/file"
+)
+
+func supportedHashAlgorithms() []crypto.Hash {
+	return []crypto.Hash{
+		crypto.MD5,
+		crypto.SHA1,
+		crypto.SHA224,
+		crypto.SHA256,
+		crypto.SHA384,
+		crypto.SHA512,
+	}
+}
+
+func NewDigestsFromFile(closer io.ReadCloser, hashes []crypto.Hash) ([]file.Digest, error) {
+	// create a set of hasher objects tied together with a single writer to feed content into
+	hashers := make([]hash.Hash, len(hashes))
+	writers := make([]io.Writer, len(hashes))
+	for idx, hashObj := range hashes {
+		hashers[idx] = hashObj.New()
+		writers[idx] = hashers[idx]
+	}
+
+	size, err := io.Copy(io.MultiWriter(writers...), closer)
+	if err != nil {
+		return nil, err
+	}
+
+	if size == 0 {
+		return make([]file.Digest, 0), nil
+	}
+
+	result := make([]file.Digest, len(hashes))
+	// only capture digests when there is content. It is important to do this based on SIZE and not
+	// FILE TYPE. The reasoning is that it is possible for a tar to be crafted with a header-only
+	// file type but a body is still allowed.
+	for idx, hasher := range hashers {
+		result[idx] = file.Digest{
+			Algorithm: CleanDigestAlgorithmName(hashes[idx].String()),
+			Value:     fmt.Sprintf("%+x", hasher.Sum(nil)),
+		}
+	}
+
+	return result, nil
+}
+
+func Hashers(names ...string) ([]crypto.Hash, error) {
+	hashByName := make(map[string]crypto.Hash)
+	for _, h := range supportedHashAlgorithms() {
+		hashByName[CleanDigestAlgorithmName(h.String())] = h
+	}
+
+	var hashers []crypto.Hash
+	for _, hashStr := range names {
+		hashObj, ok := hashByName[CleanDigestAlgorithmName(hashStr)]
+		if !ok {
+			return nil, fmt.Errorf("unsupported hash algorithm: %s", hashStr)
+		}
+		hashers = append(hashers, hashObj)
+	}
+	return hashers, nil
+}
+
+func CleanDigestAlgorithmName(name string) string {
+	lower := strings.ToLower(name)
+	return strings.ReplaceAll(lower, "-", "")
+}

internal/file/digest_test.go

@@ -0,0 +1,132 @@
+package file
+
+import (
+	"crypto"
+	"os"
+	"testing"
+
+	"github.com/stretchr/testify/assert"
+	"github.com/stretchr/testify/require"
+
+	"github.com/anchore/syft/syft/file"
+)
+
+func TestCleanDigestAlgorithmName(t *testing.T) {
+	tests := []struct {
+		name  string
+		input string
+		want  string
+	}{
+		{
+			name:  "go case",
+			input: "SHA-256",
+			want:  "sha256",
+		},
+	}
+	for _, tt := range tests {
+		t.Run(tt.name, func(t *testing.T) {
+			assert.Equal(t, tt.want, CleanDigestAlgorithmName(tt.input))
+		})
+	}
+}
+
+func TestNewDigestsFromFile(t *testing.T) {
+	require.NotEmpty(t, supportedHashAlgorithms())
+
+	tests := []struct {
+		name    string
+		fixture string
+		hashes  []crypto.Hash
+		want    []file.Digest
+		wantErr require.ErrorAssertionFunc
+	}{
+		{
+			name:    "check supported hash algorithms",
+			fixture: "test-fixtures/digest.txt",
+			hashes:  supportedHashAlgorithms(),
+			want: []file.Digest{
+				{
+					Algorithm: "md5",
+					Value:     "e8818a24402ae7f8b874cdd9350c1b51",
+				},
+				{
+					Algorithm: "sha1",
+					Value:     "eea4671d168c81fd52e615ed9fb3531a526f4748",
+				},
+				{
+					Algorithm: "sha224",
+					Value:     "fd993e84c7afb449d34bcae7c5ee118f5c73b50170da05171523b22c",
+				},
+				{
+					Algorithm: "sha256",
+					Value:     "cbf1a703b7e4a67529d6e17114880dfa9f879f3749872e1a9d4a20ac509165ad",
+				},
+				{
+					Algorithm: "sha384",
+					Value:     "1eaded3f17fb8d7b731c9175a0f355d3a35575c3cb6cdda46a5272b632968d7257a5e6437d0efae599a81a1b2dcc81ba",
+				},
+				{
+					Algorithm: "sha512",
+					Value:     "b49d5995456edba144dce750eaa8eae12af8fd08c076d401fcf78aac4172080feb70baaa5ed8c1b05046ec278446330fbf77e8ca9e60c03945ded761a641a7e1",
+				},
+			},
+		},
+	}
+	for _, tt := range tests {
+		t.Run(tt.name, func(t *testing.T) {
+			if tt.wantErr == nil {
+				tt.wantErr = require.NoError
+			}
+
+			fh, err := os.Open(tt.fixture)
+			require.NoError(t, err)
+
+			got, err := NewDigestsFromFile(fh, tt.hashes)
+			tt.wantErr(t, err)
+			if err != nil {
+				return
+			}
+			assert.Equal(t, tt.want, got)
+		})
+	}
+}
+
+func TestHashers(t *testing.T) {
+	tests := []struct {
+		name    string
+		names   []string
+		want    []crypto.Hash
+		wantErr require.ErrorAssertionFunc
+	}{
+		{
+			name:  "check supported hash algorithms",
+			names: []string{"MD-5", "shA1", "sHa224", "sha---256", "sha384", "sha512"},
+			want: []crypto.Hash{
+				crypto.MD5,
+				crypto.SHA1,
+				crypto.SHA224,
+				crypto.SHA256,
+				crypto.SHA384,
+				crypto.SHA512,
+			},
+		},
+		{
+			name:    "error on unsupported hash algorithm",
+			names:   []string{"made-up"},
+			wantErr: require.Error,
+		},
+	}
+	for _, tt := range tests {
+		t.Run(tt.name, func(t *testing.T) {
+			if tt.wantErr == nil {
+				tt.wantErr = require.NoError
+			}
+			got, err := Hashers(tt.names...)
+			tt.wantErr(t, err)
+			if err != nil {
+				return
+			}
+			assert.Equal(t, tt.want, got)
+		})
+	}
+}

internal/file/test-fixtures/digest.txt

@@ -0,0 +1 @@
+hello, file!

syft/file/cataloger/filedigest/cataloger.go

@@ -10,10 +10,11 @@ import (
 	stereoscopeFile "github.com/anchore/stereoscope/pkg/file"
 	"github.com/anchore/syft/internal"
 	"github.com/anchore/syft/internal/bus"
+	intFile "github.com/anchore/syft/internal/file"
 	"github.com/anchore/syft/internal/log"
 	"github.com/anchore/syft/syft/event"
 	"github.com/anchore/syft/syft/file"
-	internal2 "github.com/anchore/syft/syft/file/cataloger/internal"
+	intCataloger "github.com/anchore/syft/syft/file/cataloger/internal"
 )
 
 var ErrUndigestableFile = errors.New("undigestable file")
@@ -33,7 +34,7 @@ func (i *Cataloger) Catalog(resolver file.Resolver, coordinates ...file.Coordina
 	var locations []file.Location
 
 	if len(coordinates) == 0 {
-		locations = internal2.AllRegularFiles(resolver)
+		locations = intCataloger.AllRegularFiles(resolver)
 	} else {
 		for _, c := range coordinates {
 			locations = append(locations, file.NewLocationFromCoordinates(c))
@@ -82,7 +83,7 @@ func (i *Cataloger) catalogLocation(resolver file.Resolver, location file.Locati
 	}
 	defer internal.CloseAndLogError(contentReader, location.VirtualPath)
 
-	digests, err := file.NewDigestsFromFile(contentReader, i.hashes)
+	digests, err := intFile.NewDigestsFromFile(contentReader, i.hashes)
 	if err != nil {
 		return nil, internal.ErrPath{Context: "digests-cataloger", Path: location.RealPath, Err: err}
 	}

syft/file/cataloger/filedigest/cataloger_test.go

@@ -13,6 +13,7 @@ import (
 
 	stereoscopeFile "github.com/anchore/stereoscope/pkg/file"
 	"github.com/anchore/stereoscope/pkg/imagetest"
+	intFile "github.com/anchore/syft/internal/file"
 	"github.com/anchore/syft/syft/file"
 	"github.com/anchore/syft/syft/source"
 )
@@ -40,7 +41,7 @@ func testDigests(t testing.TB, root string, files []string, hashes ...crypto.Has
 			h := hash.New()
 			h.Write(b)
 			digests[file.NewLocation(f).Coordinates] = append(digests[file.NewLocation(f).Coordinates], file.Digest{
-				Algorithm: file.CleanDigestAlgorithmName(hash.String()),
+				Algorithm: intFile.CleanDigestAlgorithmName(hash.String()),
 				Value:     fmt.Sprintf("%x", h.Sum(nil)),
 			})
 		}

syft/file/digest.go

@@ -1,76 +1,6 @@
 package file
 
-import (
-	"crypto"
-	"fmt"
-	"hash"
-	"io"
-	"strings"
-)
-
 type Digest struct {
 	Algorithm string `json:"algorithm"`
 	Value     string `json:"value"`
 }
-
-func NewDigestsFromFile(closer io.ReadCloser, hashes []crypto.Hash) ([]Digest, error) {
-	// create a set of hasher objects tied together with a single writer to feed content into
-	hashers := make([]hash.Hash, len(hashes))
-	writers := make([]io.Writer, len(hashes))
-	for idx, hashObj := range hashes {
-		hashers[idx] = hashObj.New()
-		writers[idx] = hashers[idx]
-	}
-
-	size, err := io.Copy(io.MultiWriter(writers...), closer)
-	if err != nil {
-		return nil, err
-	}
-
-	if size == 0 {
-		return make([]Digest, 0), nil
-	}
-
-	result := make([]Digest, len(hashes))
-	// only capture digests when there is content. It is important to do this based on SIZE and not
-	// FILE TYPE. The reasoning is that it is possible for a tar to be crafted with a header-only
-	// file type but a body is still allowed.
-	for idx, hasher := range hashers {
-		result[idx] = Digest{
-			Algorithm: DigestAlgorithmName(hashes[idx]),
-			Value:     fmt.Sprintf("%+x", hasher.Sum(nil)),
-		}
-	}
-
-	return result, nil
-}
-
-func Hashers(names ...string) ([]crypto.Hash, error) {
-	supportedHashAlgorithms := make(map[string]crypto.Hash)
-	for _, h := range []crypto.Hash{
-		crypto.MD5,
-		crypto.SHA1,
-		crypto.SHA256,
-	} {
-		supportedHashAlgorithms[DigestAlgorithmName(h)] = h
-	}
-
-	var hashers []crypto.Hash
-	for _, hashStr := range names {
-		hashObj, ok := supportedHashAlgorithms[CleanDigestAlgorithmName(hashStr)]
-		if !ok {
-			return nil, fmt.Errorf("unsupported hash algorithm: %s", hashStr)
-		}
-		hashers = append(hashers, hashObj)
-	}
-	return hashers, nil
-}
-
-func DigestAlgorithmName(hash crypto.Hash) string {
-	return CleanDigestAlgorithmName(hash.String())
-}
-
-func CleanDigestAlgorithmName(name string) string {
-	lower := strings.ToLower(name)
-	return strings.ReplaceAll(lower, "-", "")
-}

syft/formats/common/cyclonedxhelpers/external_references.go

@@ -6,6 +6,7 @@ import (
 
 	"github.com/CycloneDX/cyclonedx-go"
 
+	"github.com/anchore/syft/internal/file"
 	syftFile "github.com/anchore/syft/syft/file"
 	"github.com/anchore/syft/syft/pkg"
 )
@@ -116,7 +117,7 @@ func decodeExternalReferences(c *cyclonedx.Component, metadata interface{}) {
 			if ref.Hashes != nil {
 				for _, hash := range *ref.Hashes {
 					digests = append(digests, syftFile.Digest{
-						Algorithm: syftFile.CleanDigestAlgorithmName(string(hash.Algorithm)),
+						Algorithm: file.CleanDigestAlgorithmName(string(hash.Algorithm)),
 						Value:     hash.Value,
 					})
 				}

syft/pkg/cataloger/java/archive_parser.go

@@ -179,7 +179,7 @@ func (j *archiveParser) discoverMainPackage() (*pkg.Package, error) {
 	defer archiveCloser.Close()
 
 	// grab and assign digest for the entire archive
-	digests, err := file.NewDigestsFromFile(archiveCloser, javaArchiveHashes)
+	digests, err := intFile.NewDigestsFromFile(archiveCloser, javaArchiveHashes)
 	if err != nil {
 		log.Warnf("failed to create digest for file=%q: %+v", j.archivePath, err)
 	}

syft/source/file_source.go

@@ -13,6 +13,7 @@ import (
 	"github.com/opencontainers/go-digest"
 
 	stereoFile "github.com/anchore/stereoscope/pkg/file"
+	intFile "github.com/anchore/syft/internal/file"
 	"github.com/anchore/syft/internal/log"
 	"github.com/anchore/syft/syft/artifact"
 	"github.com/anchore/syft/syft/file"
@@ -67,7 +68,7 @@ func NewFromFile(cfg FileConfig) (*FileSource, error) {
 
 		defer fh.Close()
 
-		digests, err = file.NewDigestsFromFile(fh, cfg.DigestAlgorithms)
+		digests, err = intFile.NewDigestsFromFile(fh, cfg.DigestAlgorithms)
 		if err != nil {
 			return nil, fmt.Errorf("unable to calculate digests for file=%q: %w", cfg.Path, err)
 		}